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2011 Publications

Book Chapters

Wang SH, Baker JR Jr.  Chapter 27, Immunopathogenesis of Thyroiditis.  In:  Immunoendocrinology:  Scientific and Clinical Aspects.  George S Eisenbarth (ed.), Humana Press, 1st Edition, 443-456, 2011.

Wang SH, Baker JR Jr. Apoptosis in thyroid cancer.  In:  Thyroid Cancer:  A comprehensive guide to clinical management. Leonard Wartofsky and  Douglas Van Nostrand (Editor), 3nd Edition, 55-62, 2011.

Mclean K, Buckanovich RJ  Epithelial Ovarian Cancer.  Tumor Board Review: Guidelines and Case Reviews in Oncology.  Demos Medical Publishing. New York, NY 10036, 2011

Publications

Colin M. Chow, Yun Zhou, Yunbo Guo, Theodore Norris, Xueding Wang, Cheri Deng, and Jing Yong Ye, “Optical Ultrasound Sensor with a Unique Open-Cavity Structure”, J. Biomed. Opt. 16, 017001 (2011). PMCID: PMC3041244

 D.B. Hondongwa, B.C. Daly, T.B. Norris, B. Yan, J. Yang, and S. Guha, “Ultrasonicattenuation in amorphous silicon at 50 and 100 GHz,” Phys. Rev. B 83, 121303(R) (2011).

 S. Bramhavar, C. Prada, A.A. Maznev, A.G. Every, T.B. Norris, and T.W. Murray, “NegativeRefraction and Focusing of Backward Propagating Lamb Waves,” Phys. Rev. B. 83,014106 (2011). DOI: 10.1103/PhysRevB.83.014106

 Dong Sun, Charles Divin, Claire Berger, Walt A. de Heer, Phillip N. First, and Theodore B.Norris, “Hot Carrier Cooling by Acoustic Phonons in Epitaxial Graphene by Ultrafast Pumpprobe Spectroscopy,” phys. stat. solidi C 8, No. 4, 1194 -1197(2011). DOI: 10.1002/pssc.201001134

 

Tkaczyk AH, Tkaczyk ER, Norris TB, Takayama S, "Microfluidic Droplet ConsistencyMonitoring and Cell Detection via Laser Excitation," Journal of Mechanics and Medicine inBiology (JMMB). (in press). Volume: 11, Issue: 1(2011) pp. 1-14 DOI: 10.1142/S0219519410003617

 

Mackay HJ, Buckanovich RJ, Hirte H, Correa R, Hoskins P, Biagi J, Martin LP, Fleming GF, Morgan R, Wang L, Polintan R, Oza AM.   A phase II study single agent of aflibercept (VEGF Trap) in patients with recurrent or metastatic gynecologic carcinosarcomas and uterine leiomyosarcoma. A trial of the Princess Margaret Hospital, Chicago and California Cancer Phase II Consortia.  Gynecol Oncol.  2012;125(1):136-40. Epub 2011 Dec 2. PMCID: PMC3303987[Available on 2013/4/1]

 

McLean K, Gong Y, Choi Y, Deng N, Yang K, Bai S, Cabrera L, Keller E, McCauley L, Cho KR, Buckanovich RJ.  Human ovarian carcinoma-associated mesenchymal stem cells regulate cancer stem cells and tumorigenesis via altered BMP production. J Clin Invest 2011;121(8):3206-3219. PMCID: PMC3148732

Sasaroli D, Gimotty PA, Pathak HB, Hammond R, Kougioumtzidou E, Katsaros D, Buckanovich R, Devarajan K, Sandaltzopoulos R, Godwin AK, Scholler N, Coukos G. Novel surface targets and serum biomarkers from the ovarian cancer vasculature. Cancer Biol Ther 2011;12(3):169-80. Epub 2011 Aug 1. PMCID: PMC3230481

 

Silva IA, Bai S, McLean K, Yang K, Griffith K, Thomas D, Ginestier C, Johnston C, Kueck A, Reynolds RK, Wicha MS, Buckanovich RJ. Aldehyde dehydrogenase in combination with CD133 defines angiogenic ovarian cancer stem cells that portend poor patient survival. Cancer Res 2011;71(11):3991-4001. Epub 2011 Apr 15. PMCID: PMC3107359

Bakhru A, Buckanovich RJ*, Griggs JJ*. (Co-senior authors)* The impact of diabetes on survival in women with ovarian cancer. Gynecol Oncol  2011;121(1):106-11. Epub 2011 Jan 13. PMID: 21236474

Free Energy Simulation to Investigate the Effect of Amino Acid Sequence Environment on the Severity of Osteogenesis Imperfecta by Glycine Mutations in Collagen.  K.-H. Lee and M. M. Banaszak Holl Biopolymers 2011, 95, 401-409. PMID: 21280025

Dual-wavelength linear regression phase unwrapping in three-dimensional microscopic images of cancer cells.  A. Khmaladze, R. Matz, C. Zhang, T. Wang, M. M. Banaszak Holl, Z. Chen.  Optics Letters 2011, 36, 912-914. PMID: 21403726

Effect of Osteogenesis Imperfecta Mutations on Free Energy of Collagen Model Peptides: A Molecular Dynamics Simulation.  K.-H. Lee, K. Kuczera, M. M. Banaszak Holl.  Biophysical Chemistry 2011, 156, 146-152. PMID: 21514034

Lindell DM, Morris SB, White MP, Kallal LE, Lundy PK, Hamouda T, Baker JR Jr, Lukacs NW.  A novel inactivated intranasal respiratory syncytial virus vaccine promotes viral clearance without Th2 associated vaccine-enhanced disease.  PLoS One 6(7), e21823, 2011. PMCID: PMC3137595

Plantinga A, Witte A, Li MH, Harmon A, Choi SK, Banaszak Holl MM, Orr BG, Baker JR Jr, Sinniah K.  Bioanalytical screening of riboflavin antagonists for targeted drug deliver – a thermodynamic and kinetic study.  ACS Med Chem Lett. 2011 May 12;2(5):363-367. PMCID: PMC3114641 [Available on 2012/5/12]

Zhang Y, Thomas TP, Lee KH, Li M, Zong H, Desai AM, Kotlyar A, Huang B, Banaszak Holl MM,  Baker JR Jr.  Polyvalent saccharide-functionalized generation 3 poly (amidoamine) dendrimer-methotrexate conjugates as a potential anticancer agent.  Bioorg Med Chem 19(8), 2557-64, 2011. PMCID: PMC3130541

Mullen DG, McNerny DQ, Desai A, Cheng XM, Dimaggio SC, Kotlyar A, Zhong Y, Qin S, Kelly CV, Thomas TP, Majoros I, Orr BG, Baker JR, Banaszak Holl MM.  Design, synthesis, and biological functionality of a dendrimer-based modular drug delivery platform. Bioconjug Chem. 2011 Apr 20;22(4):679-89. Epub 2011 Mar 22.. PMCID: PMC3089944

Isakov D, Dzutsev A, Berzofsky JA, Belyakov IM.  Lack Of IL-7 And IL-15 Signaling Affects Interferon-gamma Production by, More than Survival of, Small Intestinal Intraepithelial Memory CD8+ T Cells.  European Journal of Immunology, accepted 2011. PMID: 21928282

Belyakov IM, Ahlers JD.  Simultaneous approach using systemic, mucosal and transcutaneous routes of immunization for development of protective hiv-1 vaccines.  Current Medicinal Chemistry, 2011, 18.  PMID: 21824096 

Sui Y, Gagnon S, Dzutsev A, Zhu Q, Yu H, Hogg A, Wang Y,  Xia Z,  Belyakov IM, Venzon D, Klinman D,  Strober W, Kelsall B,  Franchini G, Berzofsky JA.  TLR agonists and/or IL-15 adjuvanted mucosal SIV-vaccine prevented gut CD4+ memory T cell loss in SIVmac251-challenged rhesus macaques. Journal of Virology 2011. PMCID: PMC3258186[Available on 2012/12/9] 

Belyakov IM, Ahlers JD.  Mucosal Immunity and HIV Infection: Applications for Mucosal AIDS Vaccine Development.  Current Topics in Microbiology and Immunology 2011; DOI: 10.1007/82_2010_119. Published online: 04 January 2011.

Thomas TP, Chang TC, Ye JY, Kotlyar A, Cao Z, Shukla R, Qin S, Norris TB, Baker JR Jr. Optical fiber-based in vivo quantification of growth factor receptors. Cancer 2011. NIHMS#312755 Pubmed ID :22488668 (2011). DOI: 10.1002/cncr.26487

Pannu J, McCarthy A, Martin A, Hamouda T, Ciotti S, Ma L, Sutcliffe J, Baker JR Jr.  In vitro antibacterial activity of NB-003 against propionibacterium acnes.  Antimicrob Agents Chemother 55(9), 4211-7, 2011. PMCID: PMC3165361

Ward BB, Dunham T, Majoros IJ, Baker JR Jr.  Targeted dendrimer chemotherapy in an animal model for head and neck squamous cell carcinoma.  J Oral Maxillofac Surg 69(9), 2452-9, 2011.  PMCID: PMC3162993

Lee KH, Kuczera K, Banaszak Holl MM. The Severity of Osteogenesis Imperfecta: A comparison to the relative free energy difference of collagen model peptides. Biopolymers 2011, 95, 182-193.  (Cover illustration)

L. R. Stanberry, J. K. Simon, C. Johnson, P. L. Robinson, J. Morry, M. R. Flack, S. Gracon, A. Myc, T. Hamouda, J. R. Baker Jr. Safety and immunogenicity of a novel nanoemulsion mucosal adjuvant W805EC combined with approved seasonal influenza antigens. : 10.1016/J.Vaccine.2011.10.094 PMID: 22079079  22079079

Choi SK, Leroueil P, Li MH, Desai A, Zong H., Van Der Spek AFL, Baker JR Jr.  Specificity and Negative Cooperativity in Dendrimer-Oxime Drug Complexation.  Macromolecules (Communication), 2011;44:4026-4029. No public access

Belyakov IM, Ahlers JD.  Simultaneous approach using systemic, mucosal and transcutaneous routes of immunization for development of protective hiv-1 vaccines   Current Medicinal Chemistry, 2011, 18. 

Wallace JM, Orr BG, Marini JC, Banaszak Holl MM. Nanoscale morphology of Type I collagen is altered in the Brtl mouse model of Osteogenesis Imperfecta. Journal of Structural Biology 2011, 173:146-152. PMCID: PMC2997118

Plantinga A, Witte A, Li MH, Harmon A, Choi SK, Banaszak Holl MM, Orr BG, Baker JR Jr, Sinniah K.  Bioanalytical Screening of Riboflavin Antagonists for Targeted Drug Delivery - A Thermodynamic and Kinetic Study.  ACS Med Chem Lett. 2011 May 12;2(5):363-367.  PMCID: PMC3114641. Note: PMC availability 5/12/12  no available link at this time

Thomas TP, Goonewardena SN, Majoros I, Kotlyar A, Cao Z, Leroueil PR, Baker JR Jr.  Folate-targeted nanoparticles show efficacy in the treatment of inflammatory arthritis.  Arthritis Rheum. 2011 May 26. doi: 10.1002/art.30459. [Epub ahead of print] NIHMS296541 

Desai AM, Andreae M, Mullen DG, Banaszak Holl MM, Baker JR Jr. Acetonitrile shortage: use of isopropanol as an alternative elution system for ultra/high performance liquid chromatograpy. Anal Methods 2011 Jan;3(1):56-58.  PMCID: PMC3092165    Note: PMC availability 1/1/12   no available link at this time

Hamouda T, Sutcliffe JA, Ciotti S, Baker JR Jr.  Intranasal immunization of ferrets with commercial trivalent influenza vaccines formulated in a nanoemulsion-based adjuvant.  Clin Vaccine Immunol. 2011 Jul;18(7):1167-75.

Mullen DG, McNerny DQ, Desai A, Cheng XM, Dimaggio SC, Kotlyar A, Zhong Y, Qin S, Kelly CV, Thomas TP, Majoros I, Orr BG, Baker JR Jr, Banaszak Holl MM.  Design, synthesis, and biological functionality of a dendrimer-based modular drug delivery platform. Bioconjug Chem, 2011 Apr 20;22(4):679-89.  PMCID: PMC3089944

Baker JR Jr.  The need to pursue and publish clinical trials in nanomedicine.  Wiley Interdiscip Rev Nanomed Nanobiotechnol, 2011 Jul;3(4):341-2.

Huang B, Desai A, Zong H, Tang S, Leroueil P, Baker JR.  Copper-free click conjugation of methotrexate to a PAMAM dendrimer platform.  Tetrahedron Lett, 52(13), 1411-1414, 2011. PMCID: PMC3048335

Zhang Y, Thomas TP, Lee KH, Li M, Zong H, Desai AM, Kotlyar A, Huang B, Banaszak Holl MM,  Baker JR Jr.  Polyvalent saccharide-functionalized generation 3 poly(amidoamine) dendrimer-methotrexate conjugate as a potential anticancer agent.  Bioorg Med Chem 19(8), 2557-64, 2011. PMCID: PMC3130541

Isakov D, Dzutsev A, Berzofsky JA, Belyakov IM. Lack Of IL-7 And IL-15 Signaling Affects Interferon-gamma Production by, More than Survival of, Small Intestinal Intraepithelial Memory CD8(+) T Cells. Eur J Immunol. 2011 Sep 19. doi: 10.1002/eji.201141453.

Patterson DP, Desai AM, Banaszak Holl MM, Marsh ENG.  Evaluation of a symmetry-based strategy for assembling protein complexes. RSC Adv.DOI: 10.1039/c1ra00282a. 

Mullen DG, Banaszak Holl MM.  Heterogeneous Ligand_Nanoparticle Distributions: A Major Obstacle to Scientific Understanding and Commercial Translation. Acc. Chem. Res. American Chemical Society, Web publication August 23, 2011.

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